Research Output

2017

Scaling up and scaling down the production of galactaric acid from pectin using Trichoderma reesei

Paasikallio, T., Huuskonen, A. & Wiebe, M., 11 Jul 2017, In : Microbial Cell Factories. 16, 1, 119.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

Single cell protein-state-of-the-art, industrial landscape and patents 2001-2016

Ritala, A., Häkkinen, S. T., Toivari, M. & Wiebe, M. G., 13 Oct 2017, In : Frontiers in Microbiology. 8, OCT, p. 2009 2009.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
35 Citations (Scopus)
2016

Genome wide analysis of protein production load in Trichoderma reesei

Pakula, T., Nygrén, H., Barth, D., Heinonen, M., Castillo, S. D., Penttilä, M. E. & Arvas, M., 2016, In : Biotechnology for Biofuels. 9, 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
10 Citations (Scopus)

Growth of marine fungi on polymeric substrates

Wang, Y., Barth, D., Tamminen, A. & Wiebe, M. G., 2016, In : BMC Biotechnology. 16, 3

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)

In vitro grown plant cells as food: A simple bioreactor for decentralised food

Ahtinen, J., Reuter, L., Pitkänen, J-P. & Rischer, H., 2016, Food Factor I Conference 2016: Book of Abstracts. Formatex Research Center

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsScientific

Malting, Brewing, and Distilling

Swanston, J. S., Wilhelmson, A., Ritala, A. & Gibson, B. R., 30 Sep 2016, Barley: Chemistry and Technology: Second Edition. Elsevier, p. 193-222 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter or book articleProfessional

1 Citation (Scopus)
Open Access
19 Citations (Scopus)

Maun säilyvyys suomalaisissa oluissa

Translated title of the contribution: Flavour stability of Finnish beersAumala, V., Mikkelson, A., Honkapää, K., Vidgren, V. & Gibson, B., 2016, In : Mallas ja Olut. 82, 1, p. 18-27

Research output: Contribution to journalArticle

Ploidy influences the functional attributes of de novo lager yeast hybrids

Krogerus, K., Arvas, M., De Chiara, M., Magalhães, F., Mattinen, L., Oja, M., Vidgren, V., Yue, J-X., Liti, G. & Gibson, B., 2016, In : Applied Microbiology and Biotechnology. 100, 16, p. 7203-7222

Research output: Contribution to journalArticle

Open Access
27 Citations (Scopus)
20 Citations (Scopus)

The lager yeast Saccharomyces pastorianus removes and transforms Fusarium trichothecene mycotoxins during fermentation of brewer's wort

Nathanail, A. V., Gibson, B., Han, L., Peltonen, K., Ollilainen, V., Jestoi, M. & Laitila, A., 2016, In : Food Chemistry. 203, p. 448-455

Research output: Contribution to journalArticleScientificpeer-review

20 Citations (Scopus)

Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction

Castillo, S., Barth, D., Arvas, M., Pakula, T. M., Pitkänen, E., Blomberg, P., Seppänen-Laakso, T., Nygren, H., Sivasiddarthan, D., Penttilä, M. & Oja, M., 2016, In : Biotechnology for Biofuels. 9, 252, 20 p.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)
20 Citations (Scopus)

Ympäristöystävällinen mallastus- ja panimoprosessi: Ecomalt projektin päätulokset

Ritala, A., Sarlin, T., Holopainen-Mantila, U., Merta, E., Honkapää, K., Jermakka, J., Gibson, B., Laitila, A. & Wilhelmson, A., 2016, In : Mallas ja Olut. 82, 2, p. 58-63

Research output: Contribution to journalArticleProfessional

2015

Analysis of Beers from an 1840s’ Shipwreck

Londesborough, J., Dresel, M., Gibson, B., Juvonen, R., Holopainen, U., Mikkelson, A., Seppänen-Laakso, T., Viljanen, K., Virtanen, H., Wilpola, A., Hofmann, T. & Wilhelmson, A., 2015, In : Journal of Agricultural and Food Chemistry. 63, 9, p. 2525-2536

Research output: Contribution to journalArticleScientificpeer-review

4 Citations (Scopus)
4 Citations (Scopus)
Open Access
9 Citations (Scopus)

Aroma formation by immobilized yeast cells in fermentation processes

Nedovic, V., Gibson, B., Mantzouridou, T. F., Bugarski, B., Djordjevic, V., Kalusevic, A., Paraskevopoulou, A., Sandell, M., Smogrovicová, D. & Yilmaztekin, M., 2015, In : Yeast. 32, 1, p. 173-216

Research output: Contribution to journalArticle

30 Citations (Scopus)

Biotransformation of trichothecene mycotoxins during fermentation with lager yeast

Nathanail, A., Gibson, B., Han, L. I., Peltonen, K., Jestoi, M. & Laitila, A., 2015, p. 143-143.

Research output: Contribution to conferenceConference PosterScientific

Capillary electrophoresis with laser-induced fluorescence detection for studying amino acid uptake by yeast during beer fermentation

Turkia, H., Sirén, H., Penttilä, M. & Pitkänen, J-P., 2015, In : Talanta. 131, p. 366-371

Research output: Contribution to journalArticle

20 Citations (Scopus)

Charge-Based Engineering of Hydrophobin HFBI: Effect on Interfacial Assembly and Interactions

Lienemann, M., Grunér, M. S., Paananen, A., Siika-Aho, M. & Linder, M. B., 27 Feb 2015, In : Biomacromolecules. 16, 4, p. 1283-1292 10 p.

Research output: Contribution to journalArticleScientificpeer-review

21 Citations (Scopus)

Identification of the scopularide biosynthetic gene cluster in Scopulariopsis brevicaulis

Lukassen, M. B., Saei, W., Sondergaard, T. E., Tamminen, A., Kumar, A., Kempken, F., Wiebe, M. G. & Sørensen, J. L., 2015, In : Marine Drugs. 13, 7, p. 4331-4343

Research output: Contribution to journalArticle

Open Access
17 Citations (Scopus)
Open Access
47 Citations (Scopus)

Novel transporters from Kluyveromyces marxianus and Pichia guilliermondii expressed in Saccharomyces cerevisiae enable growth on L-arabinose and D-xylose

Knoshaug, E. P., Vidgren, V., Magalhães, F., Jarvis, E. E., Franden, M. A., Zhang, M. & Singh, A., 2015, In : Yeast. 32, 10, p. 615-628

Research output: Contribution to journalArticleScientificpeer-review

22 Citations (Scopus)

Physicochemical characterization of sahti, an 'ancient' beer style indigenous to Finland

Ekberg, J., Gibson, B., Joensuu, J. J., Krogerus, K., Magalhães, F., Mikkelson, A., Seppänen-Laakso, T. & Wilpola, A., 2015, In : Journal of the Institute of Brewing. 121, 4, p. 464-473

Research output: Contribution to journalArticleScientificpeer-review

2 Citations (Scopus)

Process engineering for bioflavour production with metabolically active yeasts: A mini-review

Carlquist, M., Gibson, B., Karagul Yuceer, Y., Paraskevopolou, A., Sandell, M., Angelov, A. I., Gotcheva, V., Angelov, A. D., Etschmann, M., de Billerbeck, G. M. & Liden, G., 2015, In : Yeast. 32, 1, p. 123-143

Research output: Contribution to journalReview Article

27 Citations (Scopus)

Production of calcaride a by calcarisporium sp. in shaken flasks and stirred bioreactors

Tamminen, A., Wang, Y. & Wiebe, M. G., 2015, In : Marine Drugs. 13, 7, p. 3992-4005

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Raspberry wine fermentation with suspended and immobilized yeast cells of two strains of Saccharomyces cerevisiae

Djordjevic, R., Gibson, B., Sandell, M., de Billerbeck, G. M., Bugarski, B., leskosek-Cukalovic, I., Vunduk, J., Nikicevic, N. & Nedovic, V., 2015, In : Yeast. 32, 1, p. 271-279

Research output: Contribution to journalArticle

5 Citations (Scopus)

Saccharomyces pastorianus: genomic insights inspiring innovation for industry

Gibson, B. & Liti, G., 2015, In : Yeast. 32, 1, p. 17-27

Research output: Contribution to journalArticle

48 Citations (Scopus)
15 Citations (Scopus)

DesinFix TM 135 in fermentation process for bioethanol production

Barth, D., Monteiro, A. R. D. S., da Costa, M. M., Virkajärvi, I., Sacon, V. & Wilhelmson, A., 2014, In : Brazilian Journal of Microbiology. 45, 1, p. 323-325

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)

Diasetyylin muodostuminen eri lagerhiivakannoilla käymisen aikana

Gibson, B., Krogerus, K., Ekberg, J., Monroux, A., Mattinen, L., Rautio, J. & Vidgren, V., 2014, In : Mallas ja Olut. 80, 4, p. 168-169 2 p.

Research output: Contribution to journalArticle

Electrochemical properties of honeycomb-like structured HFBI self-organized membranes on HOPG electrodes

Yamasaki, R., Takatsuji, Y., Lienemann, M., Asakawa, H., Fukuma, T., Linder, M. & Haruyama, T., 2014, In : Colloids and Surfaces B: Biointerfaces. 123, p. 803-808

Research output: Contribution to journalArticle

6 Citations (Scopus)

Investigation of protein secretion and secretion stress in Ashbya gossypii

Aguiar, T. Q., Ribeiro, O., Arvas, M., Wiebe, M. G., Penttilä, M. & Domingues, L., 18 Dec 2014, In : BMC Genomics. 15, 1, 1137.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
6 Citations (Scopus)
6 Citations (Scopus)
Open Access
9 Citations (Scopus)

Molecular and functional characterization of an invertase secreted by Ashbya gossypii

Aguiar, T. Q., Dinis, C., Magalhães, F., Oliveira, C., Wiebe, M. G., Penttilä, M. & Domingues, L., 1 Jan 2014, In : Molecular Biotechnology. 56, 6, p. 524-534 11 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Molecular farming in tobacco hairy roots by triggering the secretion of a pharmaceutical antibody

Häkkinen, S. T., Raven, N., Henquet, M., Laukkanen, M-L., Anderlei, T., Pitkänen, J-P., Twyman, R. M., Bosch, D., Oksman-Caldentey, K-M., Schillberg, S. & Ritala, A., 2014, In : Biotechnology and Bioengineering. 111, 2, p. 336-346

Research output: Contribution to journalArticleScientificpeer-review

29 Citations (Scopus)

Production of D-xylonate and organic acid tolerance in yeast: Dissertation

Nygård, Y., 2014, Espoo: VTT Technical Research Centre of Finland. 168 p.

Research output: ThesisDissertationCollection of Articles

Open Access

Production of scopularide A in submerged culture with Scopulariopsis brevicaulis

Tamminen, A., Kramer, A., Labes, A. & Wiebe, M., 2014, In : Microbial Cell Factories. 13, 89, 7 p., 89.

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)

Self-assembly of Class II hydrophobins at the air-water interface

Paananen, A., Szilvay, G., Lienemann, M., Kurppa, K. & Linder, M., 2014.

Research output: Contribution to conferenceConference AbstractScientificpeer-review

Single cell and in vivo analyses elucidate the effect of xylC lactonase during production of D-xylonate in Saccharomyces cerevisiae

Nygård, Y., Maaheimo, H., Mojzita, D., Toivari, M., Wiebe, M., Resnekov, O., Gustavo Pesce, C., Ruohonen, L. & Penttilä, M., 1 Jan 2014, In : Metabolic Engineering. 25, p. 238-247

Research output: Contribution to journalArticle

13 Citations (Scopus)

The diverse role of Pdr12 in resistance to weak organic acids

Nygård, Y., Mojzita, D., Toivari, M., Penttilä, M., Wiebe, M. G. & Ruohonen, L., 1 Jan 2014, In : Yeast. 31, 6, p. 219-232 14 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Three Agt1 transporters from brewer's yeasts exhibit different temperature dependencies for maltose transport over the range of brewery temperatures (0-20 °C)

Vidgren, V., Viljanen, K., Mattinen, L., Rautio, J. & Londesborough, J., 2014, In : FEMS Yeast Research. 14, 4, p. 601-613 13 p.

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)

Transcriptome of Saccharomyces cerevisiae during production of D-xylonate

Mojzita, D., Oja, M., Rintala, E., Wiebe, M., Penttilä, M. & Ruohonen, L., 5 Sep 2014, In : BMC Genomics. 15, 1, 763.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)
2013

125th Anniversary Review: Diacetyl and its control during brewery fermentation

Krogerus, K. & Gibson, B., 2013, In : Journal of the Institute of Brewing. 119, 3, p. 86-97 7 p.

Research output: Contribution to journalReview Article

Open Access
58 Citations (Scopus)

Adaptive evolution of the lager brewing yeast Saccharomyces pastorianus for improved growth under hyperosmotic conditions and its influence on fermentation performance

Ekberg, J., Rautio, J., Mattinen, L., Vidgren, V., Londesborough, J. & Gibson, B., 2013, In : FEMS Yeast Research. 13, 3, p. 335-349 15 p.

Research output: Contribution to journalArticle

Open Access
39 Citations (Scopus)

Capillary electrophoresis for monitoring of carboxylic, phenolic and amino acids in bioprocesses: Dissertation

Turkia, H., 2013, Espoo: VTT Technical Research Centre of Finland. 146 p.

Research output: ThesisDissertationCollection of Articles

Open Access

Capillary electrophoresis for the monitoring of phenolic compounds in bioprocesses

Turkia, H., Sirén, H., Penttilä, M. & Pitkänen, J. P., 22 Feb 2013, In : Journal of Chromatography A. 1278, p. 175-180

Research output: Contribution to journalArticle

12 Citations (Scopus)