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Collaborations and top research areas from the last five years
Projects
- 1 Active
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FoodID: NSF Food Innovation and Diversification to Advance the Bioeconomy
Honkapää, K. (Manager), Sözer, N. (Owner), Nordström, E. (Owner), Ollila, S. (Manager), Aalto, A. (Participant), Uusitalo, J. (Participant), Småros, F. (Participant), Troullier, M. (Participant), Pietiäinen, M. (Participant), Juvonen, R. (Participant), Aisala, H. (Participant), Tsitko, I. (Participant), Kortekangas, A. (Participant), Lille, M. (Participant), Alakomi, H.-L. (Participant), Castillo, S. (Participant), Alaraasakka, R.-M. (Participant), Tiainen, V. (Participant), Nisov, A. (Participant) & Girych, M. (Participant)
Funded by Research Council of Finland, Business Finland
1/01/25 → 31/12/27
Project: Business Finland project
Research output
- 13 Article
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Backbone rigidity of disordered protein linkers from NMR experiments and MD simulations
Mantzari, E., Malm, C. K., Nencini, R., Sandelin, A. E. & Ollila, O. H. S., 7 Apr 2026, In: Biophysical Journal. 125, 7, p. 1753-1764 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access -
ActSeek: Fast and accurate search algorithm of active sites in Alphafold database
Castillo, S. & Ollila, O. H. S., Aug 2025, In: Bioinformatics. 41, 8, btaf424.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile2 Link opens in a new tab Citations (Scopus)92 Downloads (Pure) -
Molecular Dynamics of the Intrinsically Disordered Protein COR15A─A Force Field Validation on Structure and Dynamics
Rindfleisch, T., Nencini, R., Ollila, O. H. S., Walther, D., Miettinen, M. S. & Thalhammer, A., 23 Sept 2025, In: Journal of Chemical Theory and Computation. 21, 18, p. 9147-9163 17 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access -
Quality Evaluation Based Simulation Selection (QEBSS) for analysis of conformational ensembles and dynamics of multidomain proteins
Sandelin, A. E., Nencini, R., Yasar, E., Fudo, S., Stratoulias, V., Kajander, T. & Ollila, O. H. S., Dec 2025, In: Communications Chemistry. 8, 1, 241.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access -
Structure-Based Experimental Datasets for Benchmarking Protein Simulation Force Fields [Article v0.1]
Cavender, C. E., Case, D. A., Chen, J.C.-H., Chong, L. T., Keedy, D. A., Ollila, S., Lindorff-Larsen, K., Mobley, D. L., Oostenbrink, C., Robustelli, P., Voelz, V. A., Wall, M. E., Wych, D. C. & Gilson, M. K., 25 Mar 2025, In: Living Journal of Computational Molecular Science. 6, 1, 47 p., 3871.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access