Tiina Pakula

19962016
If you made any changes in Pure these will be visible here soon.

Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 27 Similar Profiles
Trichoderma reesei Agriculture & Biology
Trichoderma Medicine & Life Sciences
unfolded protein response Agriculture & Biology
proteins Agriculture & Biology
fungi Agriculture & Biology
Cellulase Medicine & Life Sciences
Fungi Medicine & Life Sciences
Genes Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 1996 2016

4 Citations

Genome wide analysis of protein production load in Trichoderma reesei

Pakula, T., Nygrén, H., Barth, D., Heinonen, M., Castillo, S. D., Penttilä, M. E. & Arvas, M., 2016, In : Biotechnology for Biofuels. 9, 26 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Trichoderma
genome
Genes
Genome
Proteins
2 Citations

Machine learning of protein interactions in fungal secretory pathways

Kludas, J., Arvas, M., Castillo, S., Pakula, T., Oja, M., Brouard, C., Jäntti, J., Penttilä, M. & Rousu, J., 1 Jul 2016, In : PLoS ONE. 11, 7, e0159302.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
artificial intelligence
Secretory Pathway
Learning systems
seeds
Proteins
6 Citations

Quantitative site-specific phosphoproteomics of Trichoderma reesei signaling pathways upon induction of hydrolytic enzyme production

Nguyen, E. V., Imanishi, S. Y., Haapaniemi, P., Yadav, A., Saloheimo, M., Corthals, G. L. & Pakula, T. M., 2016, In : Journal of Proteome Research. 15, 2, p. 457-467

Research output: Contribution to journalArticleResearchpeer-review

Phosphorylation
Enzyme Induction
Trichoderma
Carbon
Cellulases
1 Citations

Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction

Castillo, S., Barth, D., Arvas, M., Pakula, T. M., Pitkänen, E., Blomberg, P., Seppänen-Laakso, T., Nygren, H., Sivasiddarthan, D., Penttilä, M. & Oja, M., 2016, In : Biotechnology for Biofuels. 9, 252, 20 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
16 Citations

The effects of extracellular pH and of the transcriptional regulator PACI on the transcriptome of Trichoderma reesei

Häkkinen, M., Sivasiddarthan, D., Aro, N., Saloheimo, M. & Pakula, T. M., 2015, In : Microbial Cell Factories. 14, 63.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Trichoderma
Transcriptome
Gene encoding
Genes
Enzymes