TY - JOUR
T1 - A lytic polysaccharide monooxygenase with broad xyloglucan specificity from the brown-rot fungus Gloeophyllum trabeum and its action on cellulose-xyloglucan complexes
AU - Kojima, Yuka
AU - Várnai, Aniko
AU - Ishida, Takuya
AU - Sunagawa, Naoki
AU - Petrovic, Dejan M.
AU - Igarashi, Kiyohiko
AU - Jellison, Jody
AU - Goodell, Barry
AU - Alfredsen, Gry
AU - Westereng, Bjørge
AU - Eijsink, Vincent G.H.
AU - Yoshida, Makoto
PY - 2016
Y1 - 2016
N2 - Fungi secrete a set of glycoside hydrolases and lytic
polysaccharide monooxygenases (LPMOs) to degrade plant
polysaccharides. Brown-rot fungi, such as Gloeophyllum
trabeum, tend to have few LPMOs, and information on these
enzymes is scarce. The genome of G. trabeum encodes four
auxiliary activity 9 (AA9) LPMOs (GtLPMO9s), whose coding
sequences were amplified from cDNA. Due to alternative
splicing, two variants of GtLPMO9A seem to be produced, a
single-domain variant, GtLPMO9A-1, and a longer variant,
GtLPMO9A-2, which contains a C-terminal domain comprising
approximately 55 residues without a predicted function.
We have overexpressed the phylogenetically distinct
GtLPMO9A-2 in Pichia pastoris and investigated its
properties. Standard analyses using high-performance
anion-exchange chromatography-pulsed amperometric
detection (HPAEC-PAD) and mass spectrometry (MS) showed
that GtLPMO9A-2 is active on cellulose, carboxymethyl
cellulose, and xyloglucan. Importantly, compared to other
known xyloglucan-active LPMOs, GtLPMO9A-2 has broad
specificity, cleaving at any position along the ß-glucan
backbone of xyloglucan, regardless of substitutions.
Using dynamic viscosity measurements to compare the
hemicellulolytic action of GtLPMO9A-2 to that of a
well-characterized hemicellulolytic LPMO, NcLPMO9C from
Neurospora crassa revealed that GtLPMO9A-2 is more
efficient in depolymerizing xyloglucan. These
measurements also revealed minor activity on glucomannan
that could not be detected by the analysis of soluble
products by HPAEC-PAD andMSand that was lower than the
activity of NcLPMO9C. Experiments with copolymeric
substrates showed an inhibitory effect of hemicellulose
coating on cellulolyticLPMOactivity and did not reveal
additional activities of GtLPMO9A-2. These results
provide insight into the LPMO potential of G. trabeum and
provide a novel sensitive method, a measurement of
dynamic viscosity, for monitoring LPMO activity.
AB - Fungi secrete a set of glycoside hydrolases and lytic
polysaccharide monooxygenases (LPMOs) to degrade plant
polysaccharides. Brown-rot fungi, such as Gloeophyllum
trabeum, tend to have few LPMOs, and information on these
enzymes is scarce. The genome of G. trabeum encodes four
auxiliary activity 9 (AA9) LPMOs (GtLPMO9s), whose coding
sequences were amplified from cDNA. Due to alternative
splicing, two variants of GtLPMO9A seem to be produced, a
single-domain variant, GtLPMO9A-1, and a longer variant,
GtLPMO9A-2, which contains a C-terminal domain comprising
approximately 55 residues without a predicted function.
We have overexpressed the phylogenetically distinct
GtLPMO9A-2 in Pichia pastoris and investigated its
properties. Standard analyses using high-performance
anion-exchange chromatography-pulsed amperometric
detection (HPAEC-PAD) and mass spectrometry (MS) showed
that GtLPMO9A-2 is active on cellulose, carboxymethyl
cellulose, and xyloglucan. Importantly, compared to other
known xyloglucan-active LPMOs, GtLPMO9A-2 has broad
specificity, cleaving at any position along the ß-glucan
backbone of xyloglucan, regardless of substitutions.
Using dynamic viscosity measurements to compare the
hemicellulolytic action of GtLPMO9A-2 to that of a
well-characterized hemicellulolytic LPMO, NcLPMO9C from
Neurospora crassa revealed that GtLPMO9A-2 is more
efficient in depolymerizing xyloglucan. These
measurements also revealed minor activity on glucomannan
that could not be detected by the analysis of soluble
products by HPAEC-PAD andMSand that was lower than the
activity of NcLPMO9C. Experiments with copolymeric
substrates showed an inhibitory effect of hemicellulose
coating on cellulolyticLPMOactivity and did not reveal
additional activities of GtLPMO9A-2. These results
provide insight into the LPMO potential of G. trabeum and
provide a novel sensitive method, a measurement of
dynamic viscosity, for monitoring LPMO activity.
U2 - 10.1128/AEM.01768-16
DO - 10.1128/AEM.01768-16
M3 - Article
SN - 0099-2240
VL - 82
SP - 6557
EP - 6572
JO - Applied and Environmental Microbiology
JF - Applied and Environmental Microbiology
IS - 22
ER -