Assessment of the scalability of a microtiter plate system for screening of oleaginous microorganisms

Gergely Kosa, Kiira Vuoristo, Svein J. Horn, Boris Zimmermann, Nils Kristian Afseth, Achim Kohler, Volha Shapaval

    Research output: Contribution to journalArticleScientificpeer-review

    26 Citations (Scopus)


    Recent developments in molecular biology and metabolic engineering have resulted in a large increase in the number of strains that need to be tested, positioning high-throughput screening of microorganisms as an important step in bioprocess development. Scalability is crucial for performing reliable screening of microorganisms. Most of the scalability studies from microplate screening systems to controlled stirred-tank bioreactors have been performed so far with unicellular microorganisms. We have compared cultivation of industrially relevant oleaginous filamentous fungi and microalga in a Duetz-microtiter plate system to benchtop and pre-pilot bioreactors. Maximal glucose consumption rate, biomass concentration, lipid content of the biomass, biomass, and lipid yield values showed good scalability for Mucor circinelloides (less than 20% differences) and Mortierella alpina (less than 30% differences) filamentous fungi. Maximal glucose consumption and biomass production rates were identical for Crypthecodinium cohnii in microtiter plate and benchtop bioreactor. Most likely due to shear stress sensitivity of this microalga in stirred bioreactor, biomass concentration and lipid content of biomass were significantly higher in the microtiter plate system than in the benchtop bioreactor. Still, fermentation results obtained in the Duetz-microtiter plate system for Crypthecodinium cohnii are encouraging compared to what has been reported in literature. Good reproducibility (coefficient of variation less than 15% for biomass growth, glucose consumption, lipid content, and pH) were achieved in the Duetz-microtiter plate system for Mucor circinelloides and Crypthecodinium cohnii. Mortierella alpina cultivation reproducibility might be improved with inoculation optimization. In conclusion, we have presented suitability of the Duetz-microtiter plate system for the reproducible, scalable, and cost-efficient high-throughput screening of oleaginous microorganisms.
    Original languageEnglish
    Pages (from-to)4915-4925
    Number of pages11
    JournalApplied Microbiology and Biotechnology
    Issue number11
    Publication statusPublished - 4 Nov 2018
    MoE publication typeA1 Journal article-refereed


    • Duetz-microtiter plate system
    • Scalability
    • Bioreactors
    • High-throughput screening
    • Oleaginous microorganism


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