TY - JOUR
T1 - Effective Inclusion of Electronic Polarization Improves the Description of Electrostatic Interactions
T2 - The prosECCo75 Biomolecular Force Field
AU - Nencini, Ricky
AU - Tempra, Carmelo
AU - Biriukov, Denys
AU - Riopedre-Fernandez, Miguel
AU - Cruces Chamorro, Victor
AU - Polák, Jakub
AU - Mason, Philip E.
AU - Ondo, Daniel
AU - Heyda, Jan
AU - Ollila, O.H. Samuli
AU - Jungwirth, Pavel
AU - Javanainen, Matti
AU - Martinez-Seara, Hector
PY - 2024/9/10
Y1 - 2024/9/10
N2 - prosECCo75 is an optimized force field effectively incorporating electronic polarization via charge scaling. It aims to enhance the accuracy of nominally nonpolarizable molecular dynamics simulations for interactions in biologically relevant systems involving water, ions, proteins, lipids, and saccharides. Recognizing the inherent limitations of nonpolarizable force fields in precisely modeling electrostatic interactions essential for various biological processes, we mitigate these shortcomings by accounting for electronic polarizability in a physically rigorous mean-field way that does not add to computational costs. With this scaling of (both integer and partial) charges within the CHARMM36 framework, prosECCo75 addresses overbinding artifacts. This improves agreement with experimental ion binding data across a broad spectrum of systems─lipid membranes, proteins (including peptides and amino acids), and saccharides─without compromising their biomolecular structures. prosECCo75 thus emerges as a computationally efficient tool providing enhanced accuracy and broader applicability in simulating the complex interplay of interactions between ions and biomolecules, pivotal for improving our understanding of many biological processes.
AB - prosECCo75 is an optimized force field effectively incorporating electronic polarization via charge scaling. It aims to enhance the accuracy of nominally nonpolarizable molecular dynamics simulations for interactions in biologically relevant systems involving water, ions, proteins, lipids, and saccharides. Recognizing the inherent limitations of nonpolarizable force fields in precisely modeling electrostatic interactions essential for various biological processes, we mitigate these shortcomings by accounting for electronic polarizability in a physically rigorous mean-field way that does not add to computational costs. With this scaling of (both integer and partial) charges within the CHARMM36 framework, prosECCo75 addresses overbinding artifacts. This improves agreement with experimental ion binding data across a broad spectrum of systems─lipid membranes, proteins (including peptides and amino acids), and saccharides─without compromising their biomolecular structures. prosECCo75 thus emerges as a computationally efficient tool providing enhanced accuracy and broader applicability in simulating the complex interplay of interactions between ions and biomolecules, pivotal for improving our understanding of many biological processes.
UR - http://www.scopus.com/inward/record.url?scp=85202480303&partnerID=8YFLogxK
U2 - 10.1021/acs.jctc.4c00743
DO - 10.1021/acs.jctc.4c00743
M3 - Article
AN - SCOPUS:85202480303
SN - 1549-9618
VL - 20
SP - 7546
EP - 7559
JO - Journal of Chemical Theory and Computation
JF - Journal of Chemical Theory and Computation
IS - 17
ER -