TY - JOUR
T1 - Functional brain segmentation using inter-subject correlation in fMRI
AU - Kauppi, Jukka-Pekka
AU - Pajula, Juha
AU - Niemi, Jari
AU - Hari, Riitta
AU - Tohka, Jussi
N1 - Funding Information:
JPK was funded by the Academy of Finland Postdoctoral Researcher program (Research Council for Natural Sciences and Engineering; grant number 286019). RH was funded by the Finnish Cultural Foundation (Eminentia grant). JT received funding from the Universidad Carlos III de Madrid, the European Union's Seventh Framework Programme for research, technological development and demonstration under grant agreement nr 600371, el Ministerio de Economía y Competitividad (COFUND2013-40258) and Banco Santander. Data collection and sharing for this project were provided in part by the International Consortium for Brain Mapping (ICBM; Principal Investigator: John Mazziotta, M.D., Ph.D.). ICBM funding was provided by the National Institute of Biomedical Imaging and BioEngineering. ICBM data are disseminated by the Laboratory of Neuro Imaging at the University of Southern California. The rfMRI data in this study were provided [in part] by the Human Connectome Project, WU-Minn Consortium (Principal Investigators: David Van Essen and Kamil Ugurbil; 1U54MH091657) funded by the 16 NIH Institutes and Centers that support the NIH Blueprint for Neuroscience Research; and by the McDonnell Center for Systems Neuroscience at Washington University.
Publisher Copyright:
© 2017 Wiley Periodicals, Inc.
PY - 2017/5/1
Y1 - 2017/5/1
N2 - The human brain continuously processes massive amounts of rich sensory information. To better understand such highly complex brain processes, modern neuroimaging studies are increasingly utilizing experimental setups that better mimic daily-life situations. A new exploratory data-analysis approach, functional segmentation inter-subject correlation analysis (FuSeISC), was proposed to facilitate the analysis of functional magnetic resonance (fMRI) data sets collected in these experiments. The method provides a new type of functional segmentation of brain areas, not only characterizing areas that display similar processing across subjects but also areas in which processing across subjects is highly variable. FuSeISC was tested using fMRI data sets collected during traditional block-design stimuli (37 subjects) as well as naturalistic auditory narratives (19 subjects). The method identified spatially local and/or bilaterally symmetric clusters in several cortical areas, many of which are known to be processing the types of stimuli used in the experiments. The method is not only useful for spatial exploration of large fMRI data sets obtained using naturalistic stimuli, but also has other potential applications, such as generation of a functional brain atlases including both lower- and higher-order processing areas. Finally, as a part of FuSeISC, a criterion-based sparsification of the shared nearest-neighbor graph was proposed for detecting clusters in noisy data. In the tests with synthetic data, this technique was superior to well-known clustering methods, such as Ward's method, affinity propagation, and K-means ++. Hum Brain Mapp 38:2643–2665, 2017.
AB - The human brain continuously processes massive amounts of rich sensory information. To better understand such highly complex brain processes, modern neuroimaging studies are increasingly utilizing experimental setups that better mimic daily-life situations. A new exploratory data-analysis approach, functional segmentation inter-subject correlation analysis (FuSeISC), was proposed to facilitate the analysis of functional magnetic resonance (fMRI) data sets collected in these experiments. The method provides a new type of functional segmentation of brain areas, not only characterizing areas that display similar processing across subjects but also areas in which processing across subjects is highly variable. FuSeISC was tested using fMRI data sets collected during traditional block-design stimuli (37 subjects) as well as naturalistic auditory narratives (19 subjects). The method identified spatially local and/or bilaterally symmetric clusters in several cortical areas, many of which are known to be processing the types of stimuli used in the experiments. The method is not only useful for spatial exploration of large fMRI data sets obtained using naturalistic stimuli, but also has other potential applications, such as generation of a functional brain atlases including both lower- and higher-order processing areas. Finally, as a part of FuSeISC, a criterion-based sparsification of the shared nearest-neighbor graph was proposed for detecting clusters in noisy data. In the tests with synthetic data, this technique was superior to well-known clustering methods, such as Ward's method, affinity propagation, and K-means ++. Hum Brain Mapp 38:2643–2665, 2017.
KW - functional magnetic resonance imaging
KW - functional segmentation
KW - gaussian mixture model
KW - human brain
KW - inter-subject correlation
KW - inter-subject variability
KW - naturalistic stimulation
KW - shared nearest-neighbor graph
UR - http://www.scopus.com/inward/record.url?scp=85015094854&partnerID=8YFLogxK
U2 - 10.1002/hbm.23549
DO - 10.1002/hbm.23549
M3 - Article
C2 - 28295803
SN - 1065-9471
VL - 38
SP - 2643
EP - 2665
JO - Human Brain Mapping
JF - Human Brain Mapping
IS - 5
ER -