Improved production of human type II procollagen in the yeast Pichia pastoris in shake flasks by a wireless-controlled fed-batch system

Maria Ruottinen, Monika Bollok, Martin Kögler, Antje Neubauer, Mirja Krause, Eija-Riitta Hämäläinen, Johanna Myllyharju, Antti Vasala, Peter Neubauer

Research output: Contribution to journalArticleScientificpeer-review

18 Citations (Scopus)

Abstract

Here we describe a new technical solution for optimization of Pichia pastoris
shake flask cultures with the example of production of stable human type II collagen. Production of recombinant proteins in P. pastoris is usually performed by controlling gene expression with the strong AO X1 promoter, which is induced by addition of methanol. Optimization of processes using the AOX1 promoter in P. pastoris is generally done in bioreactors by fed-batch
fermentation with a controlled continuous addition of methanol for avoiding methanol toxification and carbon/energy starvation. The development of feedin
g protocols and the study of AOX1-controlled recombinant protein production
have been largely made in shake flasks, although shake flasks have very limited possibilities for measurement and control.
Results: By applying on-line pO2 monitoring we demonstrate that the widely
used pulse feeding of methanol results in long phases of methanol exhaustion
and consequently low expression of AOX1 controlled genes. Furthermore, we
provide a solution to apply the fed-batch strategy in shake flasks. The presented solution applies a wireless feeding unit which can be flexibly positioned and allows the use of computer-controlled feeding profiles. By using the human collagen II as an example we show that a quasi-continuous feeding profile, being the simplest way of a fed-batch fermentation, results in a higher production level of human collagen II. Moreover, the product has a higher proteolytic stability compared to control cultures due to the increased expression of human collagen prolyl 4-
hydroxylase as monitored by mRNA and protein levels.
Conclusion: The recommended standard protocol for methanol addition in shake flasks using pulse feeding is non-optimal and leads to repeated long phases of methanol starvation. The problem can be solved by applying the fed-batch technology. The presented wireless feeding unit, together with an on-line monitoring system offers a flexible, simple, and low-cost solution for initial optimization of the production in shake flasks which can be performed in parallel. By this way the fed-batch strategy can be applied from the early screening steps also in laboratories which do not have access to high-cost and complicated bioreactor systems.
Original languageEnglish
JournalBMC Biotechnology
DOIs
Publication statusPublished - 2008
MoE publication typeA1 Journal article-refereed

Fingerprint

Collagen Type II
Pichia
Methanol
Yeasts
Collagen
Bioreactors
Starvation
Recombinant Proteins
Prolyl Hydroxylases
Online Systems
Costs and Cost Analysis
Batch Cell Culture Techniques
Fermentation
Carbon
Technology
Gene Expression
Messenger RNA
Genes

Cite this

Ruottinen, Maria ; Bollok, Monika ; Kögler, Martin ; Neubauer, Antje ; Krause, Mirja ; Hämäläinen, Eija-Riitta ; Myllyharju, Johanna ; Vasala, Antti ; Neubauer, Peter. / Improved production of human type II procollagen in the yeast Pichia pastoris in shake flasks by a wireless-controlled fed-batch system. In: BMC Biotechnology. 2008.
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abstract = "Here we describe a new technical solution for optimization of Pichia pastoris shake flask cultures with the example of production of stable human type II collagen. Production of recombinant proteins in P. pastoris is usually performed by controlling gene expression with the strong AO X1 promoter, which is induced by addition of methanol. Optimization of processes using the AOX1 promoter in P. pastoris is generally done in bioreactors by fed-batchfermentation with a controlled continuous addition of methanol for avoiding methanol toxification and carbon/energy starvation. The development of feeding protocols and the study of AOX1-controlled recombinant protein productionhave been largely made in shake flasks, although shake flasks have very limited possibilities for measurement and control.Results: By applying on-line pO2 monitoring we demonstrate that the widely used pulse feeding of methanol results in long phases of methanol exhaustion and consequently low expression of AOX1 controlled genes. Furthermore, weprovide a solution to apply the fed-batch strategy in shake flasks. The presented solution applies a wireless feeding unit which can be flexibly positioned and allows the use of computer-controlled feeding profiles. By using the human collagen II as an example we show that a quasi-continuous feeding profile, being the simplest way of a fed-batch fermentation, results in a higher production level of human collagen II. Moreover, the product has a higher proteolytic stability compared to control cultures due to the increased expression of human collagen prolyl 4-hydroxylase as monitored by mRNA and protein levels.Conclusion: The recommended standard protocol for methanol addition in shake flasks using pulse feeding is non-optimal and leads to repeated long phases of methanol starvation. The problem can be solved by applying the fed-batch technology. The presented wireless feeding unit, together with an on-line monitoring system offers a flexible, simple, and low-cost solution for initial optimization of the production in shake flasks which can be performed in parallel. By this way the fed-batch strategy can be applied from the early screening steps also in laboratories which do not have access to high-cost and complicated bioreactor systems.",
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Improved production of human type II procollagen in the yeast Pichia pastoris in shake flasks by a wireless-controlled fed-batch system. / Ruottinen, Maria; Bollok, Monika ; Kögler, Martin; Neubauer, Antje; Krause, Mirja; Hämäläinen, Eija-Riitta ; Myllyharju, Johanna; Vasala, Antti; Neubauer, Peter.

In: BMC Biotechnology, 2008.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Improved production of human type II procollagen in the yeast Pichia pastoris in shake flasks by a wireless-controlled fed-batch system

AU - Ruottinen, Maria

AU - Bollok, Monika

AU - Kögler, Martin

AU - Neubauer, Antje

AU - Krause, Mirja

AU - Hämäläinen, Eija-Riitta

AU - Myllyharju, Johanna

AU - Vasala, Antti

AU - Neubauer, Peter

PY - 2008

Y1 - 2008

N2 - Here we describe a new technical solution for optimization of Pichia pastoris shake flask cultures with the example of production of stable human type II collagen. Production of recombinant proteins in P. pastoris is usually performed by controlling gene expression with the strong AO X1 promoter, which is induced by addition of methanol. Optimization of processes using the AOX1 promoter in P. pastoris is generally done in bioreactors by fed-batchfermentation with a controlled continuous addition of methanol for avoiding methanol toxification and carbon/energy starvation. The development of feeding protocols and the study of AOX1-controlled recombinant protein productionhave been largely made in shake flasks, although shake flasks have very limited possibilities for measurement and control.Results: By applying on-line pO2 monitoring we demonstrate that the widely used pulse feeding of methanol results in long phases of methanol exhaustion and consequently low expression of AOX1 controlled genes. Furthermore, weprovide a solution to apply the fed-batch strategy in shake flasks. The presented solution applies a wireless feeding unit which can be flexibly positioned and allows the use of computer-controlled feeding profiles. By using the human collagen II as an example we show that a quasi-continuous feeding profile, being the simplest way of a fed-batch fermentation, results in a higher production level of human collagen II. Moreover, the product has a higher proteolytic stability compared to control cultures due to the increased expression of human collagen prolyl 4-hydroxylase as monitored by mRNA and protein levels.Conclusion: The recommended standard protocol for methanol addition in shake flasks using pulse feeding is non-optimal and leads to repeated long phases of methanol starvation. The problem can be solved by applying the fed-batch technology. The presented wireless feeding unit, together with an on-line monitoring system offers a flexible, simple, and low-cost solution for initial optimization of the production in shake flasks which can be performed in parallel. By this way the fed-batch strategy can be applied from the early screening steps also in laboratories which do not have access to high-cost and complicated bioreactor systems.

AB - Here we describe a new technical solution for optimization of Pichia pastoris shake flask cultures with the example of production of stable human type II collagen. Production of recombinant proteins in P. pastoris is usually performed by controlling gene expression with the strong AO X1 promoter, which is induced by addition of methanol. Optimization of processes using the AOX1 promoter in P. pastoris is generally done in bioreactors by fed-batchfermentation with a controlled continuous addition of methanol for avoiding methanol toxification and carbon/energy starvation. The development of feeding protocols and the study of AOX1-controlled recombinant protein productionhave been largely made in shake flasks, although shake flasks have very limited possibilities for measurement and control.Results: By applying on-line pO2 monitoring we demonstrate that the widely used pulse feeding of methanol results in long phases of methanol exhaustion and consequently low expression of AOX1 controlled genes. Furthermore, weprovide a solution to apply the fed-batch strategy in shake flasks. The presented solution applies a wireless feeding unit which can be flexibly positioned and allows the use of computer-controlled feeding profiles. By using the human collagen II as an example we show that a quasi-continuous feeding profile, being the simplest way of a fed-batch fermentation, results in a higher production level of human collagen II. Moreover, the product has a higher proteolytic stability compared to control cultures due to the increased expression of human collagen prolyl 4-hydroxylase as monitored by mRNA and protein levels.Conclusion: The recommended standard protocol for methanol addition in shake flasks using pulse feeding is non-optimal and leads to repeated long phases of methanol starvation. The problem can be solved by applying the fed-batch technology. The presented wireless feeding unit, together with an on-line monitoring system offers a flexible, simple, and low-cost solution for initial optimization of the production in shake flasks which can be performed in parallel. By this way the fed-batch strategy can be applied from the early screening steps also in laboratories which do not have access to high-cost and complicated bioreactor systems.

U2 - 10.1186/1472-6750-8-33

DO - 10.1186/1472-6750-8-33

M3 - Article

JO - BMC Biotechnology

JF - BMC Biotechnology

SN - 1472-6750

ER -