Modelling the lignin peroxidase LIII of Phlebia radiata using a knowledge-based approach

Anna-Marja Hoffren (Corresponding Author), Markku Saloheimo, Pam Thomas, John Overington, Mark Johnson, Tom Blundell

Research output: Contribution to journalArticleScientificpeer-review

Abstract

Based on the structure of cytochrome c peroxidase a model of the lignin peroxidase LIII of the white-rot fungus Phlebia radiata was built using a knowledge-based approach. The methods used for finding tertiary structure similarities and their use in template alignment are presented. A procedure for building the lignin peroxidase model using knowledge of both homologous and non-homologous protein structures is also presented.

Original languageEnglish
Pages (from-to)2659 - 2662
Number of pages4
JournalJournal de Chimie Physique et de Physico-Chimie Biologique
Volume88
DOIs
Publication statusPublished - 1991
MoE publication typeA1 Journal article-refereed

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lignin
Cytochrome-c Peroxidase
fungi
cytochromes
Fungi
templates
alignment
proteins
Proteins
lignin peroxidase

Cite this

Hoffren, Anna-Marja ; Saloheimo, Markku ; Thomas, Pam ; Overington, John ; Johnson, Mark ; Blundell, Tom. / Modelling the lignin peroxidase LIII of Phlebia radiata using a knowledge-based approach. In: Journal de Chimie Physique et de Physico-Chimie Biologique. 1991 ; Vol. 88. pp. 2659 - 2662.
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abstract = "Based on the structure of cytochrome c peroxidase a model of the lignin peroxidase LIII of the white-rot fungus Phlebia radiata was built using a knowledge-based approach. The methods used for finding tertiary structure similarities and their use in template alignment are presented. A procedure for building the lignin peroxidase model using knowledge of both homologous and non-homologous protein structures is also presented.",
author = "Anna-Marja Hoffren and Markku Saloheimo and Pam Thomas and John Overington and Mark Johnson and Tom Blundell",
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journal = "ChemPhysChem",
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Modelling the lignin peroxidase LIII of Phlebia radiata using a knowledge-based approach. / Hoffren, Anna-Marja (Corresponding Author); Saloheimo, Markku; Thomas, Pam; Overington, John; Johnson, Mark; Blundell, Tom.

In: Journal de Chimie Physique et de Physico-Chimie Biologique, Vol. 88, 1991, p. 2659 - 2662.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Modelling the lignin peroxidase LIII of Phlebia radiata using a knowledge-based approach

AU - Hoffren, Anna-Marja

AU - Saloheimo, Markku

AU - Thomas, Pam

AU - Overington, John

AU - Johnson, Mark

AU - Blundell, Tom

N1 - Project code: BIO8005

PY - 1991

Y1 - 1991

N2 - Based on the structure of cytochrome c peroxidase a model of the lignin peroxidase LIII of the white-rot fungus Phlebia radiata was built using a knowledge-based approach. The methods used for finding tertiary structure similarities and their use in template alignment are presented. A procedure for building the lignin peroxidase model using knowledge of both homologous and non-homologous protein structures is also presented.

AB - Based on the structure of cytochrome c peroxidase a model of the lignin peroxidase LIII of the white-rot fungus Phlebia radiata was built using a knowledge-based approach. The methods used for finding tertiary structure similarities and their use in template alignment are presented. A procedure for building the lignin peroxidase model using knowledge of both homologous and non-homologous protein structures is also presented.

U2 - 10.1051/jcp/1991882659

DO - 10.1051/jcp/1991882659

M3 - Article

VL - 88

SP - 2659

EP - 2662

JO - ChemPhysChem

JF - ChemPhysChem

SN - 1439-4235

ER -