The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi

Mao Peng; Adiphol Dilokpimol; Miia R. Mäkelä; Kristiina Hildén; Sander Bervoets; Robert Riley; Igor V Grigoriev; Matthieu Hainaut; Bernard Henrissat; Ronald P. de Vries; Zoraide Granchi

doi:10.1016/j.jbiotec.2017.02.012

The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi

Mao Peng
, Adiphol Dilokpimol
, Miia R. Mäkelä
, Kristiina Hildén
, Sander Bervoets
, Robert Riley
, Igor V Grigoriev
, Matthieu Hainaut
, Bernard Henrissat
, Ronald P. de Vries^*
, Zoraide Granchi

^*Corresponding author for this work

Not published at VTT

Utrecht University
University of Helsinki
GenomeScan B.V
Joint Genome Institute (JGI)
Aix-Marseille Université

Research output: Contribution to journal › Article › Scientific › peer-review

38 Citations (Scopus)

Abstract

Here we report the genome sequence of the ascomycete saprobic fungus Penicillium subrubescens FBCC1632/CBS132785 isolated from a Jerusalem artichoke field in Finland. The 39.75Mb genome containing 14,188 gene models is highly similar for that reported for other Penicillium species, but contains a significantly higher number of putative carbohydrate active enzyme (CAZyme) encoding genes.

Original language	English
Pages (from-to)	1-3
Number of pages	3
Journal	Journal of Biotechnology
Volume	246
DOIs	https://doi.org/10.1016/j.jbiotec.2017.02.012
Publication status	Published - 20 Mar 2017
MoE publication type	A1 Journal article-refereed

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10.1016/j.jbiotec.2017.02.012

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Peng, M., Dilokpimol, A., Mäkelä, M. R., Hildén, K., Bervoets, S., Riley, R., Grigoriev, I. V., Hainaut, M., Henrissat, B., de Vries, R. P., & Granchi, Z. (2017). The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi. Journal of Biotechnology, 246, 1-3. https://doi.org/10.1016/j.jbiotec.2017.02.012

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title = "The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi",

abstract = "Here we report the genome sequence of the ascomycete saprobic fungus Penicillium subrubescens FBCC1632/CBS132785 isolated from a Jerusalem artichoke field in Finland. The 39.75Mb genome containing 14,188 gene models is highly similar for that reported for other Penicillium species, but contains a significantly higher number of putative carbohydrate active enzyme (CAZyme) encoding genes.",

author = "Mao Peng and Adiphol Dilokpimol and M{\"a}kel{\"a}, \{Miia R.\} and Kristiina Hild{\'e}n and Sander Bervoets and Robert Riley and Grigoriev, \{Igor V\} and Matthieu Hainaut and Bernard Henrissat and \{de Vries\}, \{Ronald P.\} and Zoraide Granchi",

note = "Publisher Copyright: {\textcopyright} 2017 Elsevier B.V.",

year = "2017",

month = mar,

day = "20",

doi = "10.1016/j.jbiotec.2017.02.012",

language = "English",

volume = "246",

pages = "1--3",

journal = "Journal of Biotechnology",

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Peng, M, Dilokpimol, A, Mäkelä, MR, Hildén, K, Bervoets, S, Riley, R, Grigoriev, IV, Hainaut, M, Henrissat, B, de Vries, RP & Granchi, Z 2017, 'The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi', Journal of Biotechnology, vol. 246, pp. 1-3. https://doi.org/10.1016/j.jbiotec.2017.02.012

The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi. / Peng, Mao; Dilokpimol, Adiphol; Mäkelä, Miia R. et al.
In: Journal of Biotechnology, Vol. 246, 20.03.2017, p. 1-3.

Research output: Contribution to journal › Article › Scientific › peer-review

TY - JOUR

T1 - The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi

AU - Peng, Mao

AU - Dilokpimol, Adiphol

AU - Mäkelä, Miia R.

AU - Hildén, Kristiina

AU - Bervoets, Sander

AU - Riley, Robert

AU - Grigoriev, Igor V

AU - Hainaut, Matthieu

AU - Henrissat, Bernard

AU - de Vries, Ronald P.

AU - Granchi, Zoraide

PY - 2017/3/20

Y1 - 2017/3/20

N2 - Here we report the genome sequence of the ascomycete saprobic fungus Penicillium subrubescens FBCC1632/CBS132785 isolated from a Jerusalem artichoke field in Finland. The 39.75Mb genome containing 14,188 gene models is highly similar for that reported for other Penicillium species, but contains a significantly higher number of putative carbohydrate active enzyme (CAZyme) encoding genes.

AB - Here we report the genome sequence of the ascomycete saprobic fungus Penicillium subrubescens FBCC1632/CBS132785 isolated from a Jerusalem artichoke field in Finland. The 39.75Mb genome containing 14,188 gene models is highly similar for that reported for other Penicillium species, but contains a significantly higher number of putative carbohydrate active enzyme (CAZyme) encoding genes.

UR - https://www.scopus.com/pages/publications/85013130574

U2 - 10.1016/j.jbiotec.2017.02.012

DO - 10.1016/j.jbiotec.2017.02.012

M3 - Article

C2 - 28216099

SN - 0168-1656

VL - 246

SP - 1

EP - 3

JO - Journal of Biotechnology

JF - Journal of Biotechnology

ER -

The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi

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