Trichoderma reesei sequences that bind to the nuclear matrix enhance transformation frequency

N. J. Belshaw, S. Hakola, H. Nevalainen, M. Penttilä, P. Suominen, D. B. Archer

Research output: Contribution to journalArticleScientificpeer-review

6 Citations (Scopus)

Abstract

Three DNA fragments, trs1, 2 and 3, were isolated from the Trichoderma reesei genome on the basis of their ability to promote autonomous replication of plasmids in Saccharomyces cerevisiae. Each trs element bound specifically to the isolated T. reesei nuclear matrix in vitro, and two of them bound in vivo, indicating that they are matrix attachment regions (MARs). A similar sequence previously isolated from Aspergillus nidulans (ans1) was also shown to bind specifically to the T. reesei nuclear matrix in vitro. The T. reesei MARs are AT-rich sequences containing 70%: 86% and 73% A+T over 2.9, 0.8 and 3.7 kb. respectively for trs1, 2 and 3. They exhibited no significant sequence homology, but were shown to contain a number of sequence motifs that occur frequently in many MARs identified in other eukaryotes. However, these motifs occurred as frequently in the trs elements as in randomly generated sequences with the same A+T content. trs1 and 3 were shown to be present as single copies in the T. reesei genome. The presence of the trs elements in transforming plasmids enhanced the frequency of integrative transformation of T. reesei up to five fold over plasmids without a trs. No evidence was obtained to suggest that the trs elements promoted efficient replication of plasmids in T. reseei. A mechanism for the enhancement of transformation frequency by the trs elements is proposed.

Original languageEnglish
Pages (from-to)18-27
Number of pages10
JournalMolecular and General Genetics
Volume256
Issue number1
DOIs
Publication statusPublished - 3 Nov 1997
MoE publication typeA1 Journal article-refereed

Fingerprint

Nuclear Matrix
Trichoderma
Matrix Attachment Regions
Plasmids
AT Rich Sequence
Genome
Aspergillus nidulans
Sequence Homology
Eukaryota
DNA Replication
Saccharomyces cerevisiae
DNA
In Vitro Techniques

Keywords

  • Autonomously replicating sequence
  • Matrix attachment region
  • Nuclear matrix
  • Transformation
  • Trichoderma reesei

Cite this

Belshaw, N. J. ; Hakola, S. ; Nevalainen, H. ; Penttilä, M. ; Suominen, P. ; Archer, D. B. / Trichoderma reesei sequences that bind to the nuclear matrix enhance transformation frequency. In: Molecular and General Genetics. 1997 ; Vol. 256, No. 1. pp. 18-27.
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Trichoderma reesei sequences that bind to the nuclear matrix enhance transformation frequency. / Belshaw, N. J.; Hakola, S.; Nevalainen, H.; Penttilä, M.; Suominen, P.; Archer, D. B.

In: Molecular and General Genetics, Vol. 256, No. 1, 03.11.1997, p. 18-27.

Research output: Contribution to journalArticleScientificpeer-review

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T1 - Trichoderma reesei sequences that bind to the nuclear matrix enhance transformation frequency

AU - Belshaw, N. J.

AU - Hakola, S.

AU - Nevalainen, H.

AU - Penttilä, M.

AU - Suominen, P.

AU - Archer, D. B.

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